BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B12SP1|AL425652
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig740 1526 0.0
>3x_Contig740
Length = 2091
Score = 1526 bits (770), Expect = 0.0
Identities = 770/770 (100%)
Strand = Plus / Plus
Query: 1 aggatccaattcggcgtatacgatctcttcaccttcaccagcttctgcaatgatttcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aggatccaattcggcgtatacgatctcttcaccttcaccagcttctgcaatgatttcacc 441
Query: 61 tcttggattaaccaccaaactatgaccataagcctgataaccagagcccccacttctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcttggattaaccaccaaactatgaccataagcctgataaccagagcccccacttctagc 501
Query: 121 tggtgagcacaagatggtataaatctcgttgtcgatactacgagatctggccaaaaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tggtgagcacaagatggtataaatctcgttgtcgatactacgagatctggccaaaaggtg 561
Query: 181 ccagtgcattggaccggtggtagtgttgaaagcacttggataaatcatagcaaatgcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccagtgcattggaccggtggtagtgttgaaagcacttggataaatcatagcaaatgcacc 621
Query: 241 ttttctggcactaaccatagcaagttccggaaatctcatatcgtaacagataccgacacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttttctggcactaaccatagcaagttccggaaatctcatatcgtaacagataccgacacc 681
Query: 301 aaatttaccgatctttggatcatcaatcaacgtatttttgttcccaccagatagagtaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaatttaccgatctttggatcatcaatcaacgtatttttgttcccaccagatagagtaac 741
Query: 361 ggattccttgaaagtgataccatttggaatatcaatatcgaaaagatgtgctttacgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ggattccttgaaagtgataccatttggaatatcaatatcgaaaagatgtgctttacgatg 801
Query: 421 tgtgccaatgatctcaccatcttcattaaagataagagacgtgttatatattttgtctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tgtgccaatgatctcaccatcttcattaaagataagagacgtgttatatattttgtctgt 861
Query: 481 agaaggttctagctctgggatggaaccaccaactagtgtgactttccatttgcgagcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 agaaggttctagctctgggatggaaccaccaactagtgtgactttccatttgcgagcaat 921
Query: 541 ctcagataacgctttcaccgatgtcgcgtcaggtgtgattacttcggcatattctctgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ctcagataacgctttcaccgatgtcgcgtcaggtgtgattacttcggcatattctctgaa 981
Query: 601 cttatcaactgcatatggagcgttgaaaaattctggtaacacaaccagtttcgtatccgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 cttatcaactgcatatggagcgttgaaaaattctggtaacacaaccagtttcgtatccgg 1041
Query: 661 ttgtgcatccatggctttagcaacgaattgagcggctctgctcaaattcgcactcttgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ttgtgcatccatggctttagcaacgaattgagcggctctgctcaaattcgcactcttgtc 1101
Query: 721 aggcgaagatcctgctaactgaactaaagctaccttcaacttagatttca 770
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 aggcgaagatcctgctaactgaactaaagctaccttcaacttagatttca 1151
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4913
Number of Sequences: 1807
Number of extensions: 4913
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)